Unsplashed background img 1

DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FLCflowering time traitgrowth chamber studyratio167
After Vern Growthrelative growth rategrowth chamber studyratio110
FRIflowering time traitgrowth chamber studyratio164
Seedling Growthrelative growth rategrowth chamber studyratio100
Storage 28 daysseed dormancygrowth chamber studypercent110
Storage 7 daysseed dormancygrowth chamber studypercent110
Storage 56 daysseed dormancygrowth chamber studypercent110
Germ in darkgerminability in darkgrowth chamber studypercent93
Vern Growthrelative growth rategrowth chamber studypercent110
Secondary Dormancygermination ratiogrowth chamber studypercent93
FT Diameter Fieldleaf numbergrowth chamber studylength unit180
FW leaf necrosisgrowth chamber studygram95
DW leaf necrosisgrowth chamber studygram95
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit176
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit110
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit174
Emco5protist disease resistancegrowth chamber studydimensionless unit86
Leaf roll 16rolled leafgrowth chamber studydimensionless unit176
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit177
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit176