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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FT10days to flowering traitgrowth chamber studyday194
FT22days to flowering traitgrowth chamber studyday193
FT16days to flowering traitgrowth chamber studyday193
FT Fielddays to flowering traitgrowth chamber studyday180
FT Diameter Fieldleaf numbergrowth chamber studylength unit180
Germ 22days to germinategrowth chamber studyday177
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit177
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit177
Germ 10days to germinategrowth chamber studyday177
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit177
LN10leaf numbergrowth chamber studycount unit177
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit177
Leaf roll 22rolled leafgrowth chamber studydimensionless unit176
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit176
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit176
Germ 16days to germinategrowth chamber studyday176
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit176
Width 10plant widthgrowth chamber studycentimeter176
Leaf roll 16rolled leafgrowth chamber studydimensionless unit176
LN22leaf numbergrowth chamber studycount unit176