| 7403 | Wei-1 | SUI | Wei | Eric Holub | 8.26 | 47.25 | — | Regmap 250k, Full imputed | 26 |
| 6979 | Wei-0 | SUI | Wei | Alan Slusarenko | 8.26 | 47.25 | CS76628 | Regmap 250k, 1001 Genomes, Full imputed | 972 |
| 7405 | Wc-2 | GER | Westercelle | Albert Kranz | 10.0667 | 52.6 | — | Regmap 250k, Full imputed | 137 |
| 7404 | Wc-1 | GER | Westercelle | Albert Kranz | 10.0667 | 52.6 | CS76627 | Regmap 250k, 1001 Genomes, Full imputed | 285 |
| 9795 | Wank-2 | GER | Wankheim | 0 | 9.11 | 48.5 | CS78852 | 1001 Genomes, Full imputed | 139 |
| 10003 | WalHaesB4 | GER | Walddorf-Haslach | — | 9.19 | 48.6 | — | - | 13 |
| 7393 | Wag-6 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | - | 0 |
| 7392 | Wag-5 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | Regmap 250k, Full imputed | 123 |
| 7391 | Wag-4 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | Regmap 250k, Full imputed | 119 |
| 7390 | Wag-3 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | Regmap 250k, Full imputed | 162 |
| 7389 | Wag-2 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | - | 0 |
| 7388 | Wag-1 | NED | Wag | Maarten Koornneef | 5.6666 | 51.9666 | — | - | 0 |
| 7394 | Wa-1 | Poland | Wa | Albert Kranz | 21.0 | 52.3 | CS76626 | Regmap 250k, 1001 Genomes, Full imputed | 292 |
| 6978 | Wa-1 | Poland | Wa | Albert Kranz | 21.0 | 52.3 | — | Regmap 250k, Full imputed | 204 |
| 400 | WHA2 | UK | WHA2 | Valerie Le Corre | -4.0 | 53.0 | — | - | 3 |
| 399 | WHA1 | UK | WHA1 | Valerie Le Corre | -4.0 | 53.0 | — | - | 3 |
| 9938 | WAV-8 | France | — | 0 | 2.99 | 50.65 | CS78854 | 1001 Genomes, Full imputed | 138 |
| 7477 | WAR | US | Lincoln Woods State Park | Massimo Pigliucci | -71.2825 | 41.7302 | CS78853 | Regmap 250k, 1001 Genomes, Full imputed | 756 |
| 9476 | VårA 1 | Sweden | Vårhallarna | Alison Anastasio | 14.3336 | 55.5796 | CS78832 | Regmap 250k, 1001 Genomes, Full imputed | 508 |
| 7517 | Vår2-6 | Sweden | Vår2 | Magnus Nordborg | 14.334 | 55.58 | CS78831 | Regmap 250k, 1001 Genomes, Full imputed | 605 |
