Phenotype: Sterol
ID:
1316
Study:
AraGWAS Associations:
Scoring:
3 g of fresh seedlings, supplemented with internal standards were homogenized in 20 ml of chloroform/methanol solution (1/1, v/v) and extracted for 24 h at 25 °C.
Growth conditions:
Plants were grown in a growth chamber in a long day (16 h light) photoperiod at 22 °C/18 °C at day/night. The seeds were surface-sterilized by treatment with an aqueous solution of 5% calcium hypochlorite for 8 min, subsequently rinsed four times with sterile water and planted on plates. Before location in the growth chamber, plates with seeds were kept for 4 days at 4 °C in darkness for stratification. The Arabidopsis accessions were grown on Petri dishes on solid ½ Murashige-Skoog medium with vitamins and 0.8% agar. For each genotype analyzed plants were cultivated in at least three biological replicates. For the isolation of isoprenoids, entire 3-week-old seedlings were used.
3 g of seedlings were homogenized in 6 ml ethanol and extracted for 24 h at 25 °C.
Trait-Ontology:
Environment ontology:
Unit:
Shapiro-Wilk*:
'1.67e-11' (p-value)
Submission date:
Oct. 25, 2020, 12:47 p.m.
* The Shapiro-Wilk test tests the null hypothesis that the data was drawn from a normal distribution.
Geographic distribution of 114 accessions
Phenotype Publications
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GWAS analysis combined with QTL mapping identify CPT3 and ABH as genes underlying dolichol accumulation in Arabidopsis
[]. 2020 None: None. doi: https://doi.org/10.1101/2020.10.21.348912