Study: Genetic dissection of shoot regeneration from root explants in Arabidopsis (Lardon et al., 2020)
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DOI
Description
In the frame of a genome-wide association study, we have subjected 170 natural Arabidopsis thaliana accessions to two protocol variants for shoot regeneration from root explants and recorded substantial variation in regenerated shoot numbers and several related in vitro traits. The results of this study are reported in "The genetic framework of shoot regeneration in Arabidopsis comprises master regulators and conditional fine-tuning factors" (Lardon et al., Commun. Biol., 2020).
Publications

Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
callus score 21d protocol bin vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit2165
callus score 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1711
callus score 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit2164
callus score 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1713
area 21d protocol bin vitro plant structure morphology traitin vitro solid growth mediumarea unit2148
area 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumarea unit1688
area 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumarea unit2132
area 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumarea unit1703