Accession: Col-0
Species:
Arabidopsis thaliana
Country:
US
Sitename:
Col
Collector:
Albert Kranz
Collected on:
-
Lat/Lon:
38.3 / -92.3
CS number:
Map
Scored in 3678 phenotypes:
| Phenotype Name | Trait Ontology (TO) | Environmental Ontoloy (EO) | Unit Ontology (UO) | # values | Study | Value (mean) |
|---|---|---|---|---|---|---|
| At1 | bacterial disease resistance | growth chamber study | colony forming unit | 1 | Atwell et. al, Nature 2010 | 2.333 |
| Ca43 | calcium concentration | growth chamber study | concentration unit | 158 | Ion Concentration | 61889.7254863 |
| LRDpMR0 | root morphology trait | vertical agar growth medium | count unit | 1 | Salt induced changes in Root System Architecture | 2.56486975 |
| Mean(R) CK | root branching | cytokinin treatment | unit | 1 | Cytokinin (CK) treatment | 18.459 |
| SizeLocSweden2009 | — | — | dimensionless unit | 1 | Flowering time in simulated seasons | -0.975 |
| avrPphB | bacterial disease resistance | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 1.0 |
| Area sweden 2009 (1st experiment) | — | — | square centimeter | 1 | Flowering time in simulated seasons | 19131.5 |
| Germ 10 | days to germinate | growth chamber study | day | 1 | Atwell et. al, Nature 2010 | 5.0 |
| Size spain 2009 (2nd experiment) | — | — | centimeter | 1 | Flowering time in simulated seasons | 8.175 |
| callus score 21d protocol a | in vitro plant structure morphology trait | in vitro solid growth medium | dimensionless unit | 12 | Genetic dissection of shoot regeneration from root explants in Arabidopsis (Lardon et al., 2020) | 0.0833333333333 |
| Depth125 | root morphology trait | vertical agar growth medium | length unit | 1 | Salt induced changes in Root System Architecture | 1.688834 |
| Hypocotyl length | seedling hypocotyl length | growth chamber study | centimeter | 1 | Atwell et. al, Nature 2010 | 4.03 |
| Leaf Cu Mine (μg/g) | copper concentration | green house study | microgram | 1 | Pb Mine soil | 7.25 |
| PC1sc75 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -7.020767558 |
| Straight75 | root morphology trait | vertical agar growth medium | ratio | 1 | Salt induced changes in Root System Architecture | 0.86191325 |
| Mn55 | manganese concentration | growth chamber study | concentration unit | 1 | Atwell et. al, Nature 2010 | 80.0905 |
| FT16 | days to flowering trait | growth chamber study | day | 1 | Atwell et. al, Nature 2010 | 32.0 |
| Leaf serr 16 | leaf margin serrated | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 0.75 |
| Hiks1 | protist disease resistance | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 1.0 |
| YieldPlantingSummerLocSweden2009 | seed weight | — | dimensionless unit | 1 | Flowering time in simulated seasons | -0.117574 |