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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Seedling Growthrelative growth rategrowth chamber studyratio100
Emco5protist disease resistancegrowth chamber studydimensionless unit86
Noco2protist disease resistancegrowth chamber studydimensionless unit87
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
Hiks1protist disease resistancegrowth chamber studydimensionless unit84
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
K39potassium concentrationgrowth chamber studyconcentration unit93
Width 16plant widthgrowth chamber studycentimeter175
Width 10plant widthgrowth chamber studycentimeter176
Width 22plant widthgrowth chamber studycentimeter175
P31phosphorus concentrationgrowth chamber studyconcentration unit93
Ni60nickel concenterationgrowth chamber studyconcentration unit93
Mo98molybdenum concentrationgrowth chamber studyconcentration unit93
Mn55manganese concentrationgrowth chamber studyconcentration unit93
Mg25magnesium concentrationgrowth chamber studyconcentration unit93
Li7lithium concentrationgrowth chamber studyconcentration unit93
Trichome avg Cleaf trichome densitygrowth chamber studycount unit94
Trichome avg JAleaf trichome densitygrowth chamber studycount unit94
FT Diameter Fieldleaf numbergrowth chamber studylength unit180
8W GH LNleaf numbergrowth chamber studycount unit163