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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
After Vern Growthrelative growth rategrowth chamber studyratio
Seedling Growthrelative growth rategrowth chamber studyratio
FRIflowering time traitgrowth chamber studyratio
FLCflowering time traitgrowth chamber studyratio
Germ in darkgerminability in darkgrowth chamber studypercent
Storage 28 daysseed dormancygrowth chamber studypercent
Storage 7 daysseed dormancygrowth chamber studypercent
Vern Growthrelative growth rategrowth chamber studypercent
Storage 56 daysseed dormancygrowth chamber studypercent
Secondary Dormancygermination ratiogrowth chamber studypercent
FT Diameter Fieldleaf numbergrowth chamber studylength unit
FW leaf necrosisgrowth chamber studygram
DW leaf necrosisgrowth chamber studygram
Emco5protist disease resistancegrowth chamber studydimensionless unit
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit
YEL leaf chlorosisgrowth chamber studydimensionless unit
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit
Noco2protist disease resistancegrowth chamber studydimensionless unit