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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Cu65copper concentrationgrowth chamber studyconcentration unit93
Se82selenium concentrationgrowth chamber studyconcentration unit93
Ca43calcium concentrationgrowth chamber studyconcentration unit93
B11boron concentrationgrowth chamber studyconcentration unit93
Ni60nickel concenterationgrowth chamber studyconcentration unit93
P31phosphorus concentrationgrowth chamber studyconcentration unit93
As75arsenic concentrationgrowth chamber studyconcentration unit93
Germ in darkgerminability in darkgrowth chamber studypercent93
Mo98molybdenum concentrationgrowth chamber studyconcentration unit93
Zn66zinc concentrationgrowth chamber studyconcentration unit93
S34sulfur concentrationgrowth chamber studyconcentration unit93
Mn55manganese concentrationgrowth chamber studyconcentration unit93
Fe56iron concentrationgrowth chamber studyconcentration unit93
Li7lithium concentrationgrowth chamber studyconcentration unit93
Mg25magnesium concentrationgrowth chamber studyconcentration unit93
Secondary Dormancygermination ratiogrowth chamber studypercent93
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit90
avrRpt2bacterial disease resistancegrowth chamber studydimensionless unit89
Hypocotyl lengthseedling hypocotyl lengthgrowth chamber studycentimeter89
Noco2protist disease resistancegrowth chamber studydimensionless unit87