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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
K39potassium concentrationgrowth chamber studyconcentration unit93
Emco5protist disease resistancegrowth chamber studydimensionless unit86
Noco2protist disease resistancegrowth chamber studydimensionless unit87
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
Hiks1protist disease resistancegrowth chamber studydimensionless unit84
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
After Vern Growthrelative growth rategrowth chamber studyratio110
Vern Growthrelative growth rategrowth chamber studypercent110
Seedling Growthrelative growth rategrowth chamber studyratio100
FT Duration GHreproductive growth timegrowth chamber studyday147
MT GHreproductive growth timegrowth chamber studyday147
LC Duration GHreproductive growth timegrowth chamber studyday147
RP GHreproductive growth timegrowth chamber studyday147
LFS GHreproductive growth timegrowth chamber studyday148
Leaf roll 16rolled leafgrowth chamber studydimensionless unit176
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit176
Leaf roll 22rolled leafgrowth chamber studydimensionless unit176
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit110
Storage 28 daysseed dormancygrowth chamber studypercent110
Storage 7 daysseed dormancygrowth chamber studypercent110