Unsplashed background img 1

DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FT Fielddays to flowering traitgrowth chamber studyday180
LDdays to flowering traitgrowth chamber studyday167
Seed Dormancyseed dormancygrowth chamber studyday83
8W GH FTdays to flowering traitgrowth chamber studyday162
4Wdays to flowering traitgrowth chamber studyday119
FT22days to flowering traitgrowth chamber studyday193
SDVdays to flowering traitgrowth chamber studyday159
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit176
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit110
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit174
Emco5protist disease resistancegrowth chamber studydimensionless unit86
Leaf roll 16rolled leafgrowth chamber studydimensionless unit176
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit177
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit176
LY leaf necrosisgrowth chamber studydimensionless unit95
avrRpm1bacterial disease resistancegrowth chamber studydimensionless unit84
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit176
YEL leaf chlorosisgrowth chamber studydimensionless unit95
Noco2protist disease resistancegrowth chamber studydimensionless unit87
avrRpt2bacterial disease resistancegrowth chamber studydimensionless unit89