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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Germ 16days to germinategrowth chamber studyday
FT Fielddays to flowering traitgrowth chamber studyday
LDdays to flowering traitgrowth chamber studyday
8W GH FTdays to flowering traitgrowth chamber studyday
4Wdays to flowering traitgrowth chamber studyday
FT22days to flowering traitgrowth chamber studyday
SDVdays to flowering traitgrowth chamber studyday
Leaf roll 22rolled leafgrowth chamber studydimensionless unit
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit
Leaf roll 16rolled leafgrowth chamber studydimensionless unit
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit
Emco5protist disease resistancegrowth chamber studydimensionless unit
Asbacterial disease resistancegrowth chamber studydimensionless unit
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit
Anthocyanin 16anthocyanin contentgrowth chamber studydimensionless unit
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit