| 9919 | BRE-14 | France | — | 0 | 4.45 | 48.85 | — | - | 9 |
| 9813 | BI-4 | GER | Bad Imnau | 0 | 8.77 | 48.4 | CS76706 | 1001 Genomes, Full imputed | 145 |
| 9928 | BEZ-9 | France | — | 0 | 3.77 | 44.12 | CS76703 | 1001 Genomes, Full imputed | 130 |
| 9935 | BAU-15 | France | — | 0 | 2.93 | 50.6 | CS76694 | 1001 Genomes, Full imputed | 133 |
| 9184 | Ayu-Dag-9 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9183 | Ayu-Dag-8 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9182 | Ayu-Dag-6 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9181 | Ayu-Dag-5 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9180 | Ayu-Dag-4 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9179 | Ayu-Dag-3 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | Regmap 250k, Full imputed | 36 |
| 9178 | Ayu-Dag-2 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 9177 | Ayu-Dag-1 | Ukraine | Ayu-Dag | James Beck | 34.3217 | 44.5656 | — | - | 0 |
| 7001 | Aur-0 | US | Aur | James Altland | -122.756 | 45.2296 | — | - | 0 |
| 5711 | Asp-1 | UK | Aspatria | Eric Holub | -3.3 | 54.8 | — | Regmap 250k, Full imputed | 0 |
| 6998 | Arby-1 | Sweden | Arby | Maarten Koornneef | 16.79994 | 59.43078 | — | Regmap 250k, Full imputed | 89 |
| 10015 | Ara-1 | Afghanistan | — | — | 71.3 | 37.29 | CS76382 | 1001 Genomes, Full imputed | 37 |
| 6997 | Appt-1 | NED | Appt | Maarten Koornneef | 5.5833 | 51.8333 | CS76440 | 1001 Genomes, Full imputed | 167 |
| 8255 | App1-4 | Sweden | App1 | Magnus Nordborg | 15.9667 | 56.3333 | — | - | 0 |
| 5832 | App1-16 | Sweden | App1 | Magnus Nordborg | 15.9667 | 56.3333 | CS76669 | Regmap 250k, 1001 Genomes, Full imputed | 644 |
| 5831 | App1-14 | Sweden | App1 | Magnus Nordborg | 15.9667 | 56.3333 | CS76668 | Regmap 250k, 1001 Genomes, Full imputed | 509 |
