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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Secondary Dormancygermination ratiogrowth chamber studypercent
Se82selenium concentrationgrowth chamber studyconcentration unit
SDVdays to flowering traitgrowth chamber studyday
SDdays to flowering traitgrowth chamber studyday
S34sulfur concentrationgrowth chamber studyconcentration unit
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit
RP GHreproductive growth timegrowth chamber studyday
P31phosphorus concentrationgrowth chamber studyconcentration unit
Noco2protist disease resistancegrowth chamber studydimensionless unit
Ni60nickel concenterationgrowth chamber studyconcentration unit
Na23sodium concentrationgrowth chamber studyconcentration unit
Mo98molybdenum concentrationgrowth chamber studyconcentration unit
Mn55manganese concentrationgrowth chamber studyconcentration unit
Mg25magnesium concentrationgrowth chamber studyconcentration unit
MT GHreproductive growth timegrowth chamber studyday
Li7lithium concentrationgrowth chamber studyconcentration unit
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit
Leaf roll 22rolled leafgrowth chamber studydimensionless unit