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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Leaf roll 16rolled leafgrowth chamber studydimensionless unit
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit
LY leaf necrosisgrowth chamber studydimensionless unit
LN22leaf numbergrowth chamber studycount unit
LN16leaf numbergrowth chamber studycount unit
LN10leaf numbergrowth chamber studycount unit
LFS GHreproductive growth timegrowth chamber studyday
LESleaf necrosisgrowth chamber studydimensionless unit
LDVdays to flowering traitgrowth chamber studyday
LDdays to flowering traitgrowth chamber studyday
LC Duration GHreproductive growth timegrowth chamber studyday
K39potassium concentrationgrowth chamber studyconcentration unit
Hypocotyl lengthseedling hypocotyl lengthgrowth chamber studycentimeter
Hiks1protist disease resistancegrowth chamber studydimensionless unit
Germ in darkgerminability in darkgrowth chamber studypercent
Germ 22days to germinategrowth chamber studyday
Germ 16days to germinategrowth chamber studyday
Germ 10days to germinategrowth chamber studyday
Fe56iron concentrationgrowth chamber studyconcentration unit
FW leaf necrosisgrowth chamber studygram