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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Ca43calcium concentrationgrowth chamber studyconcentration unit93
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Bsbacterial disease resistancegrowth chamber studycount unit175
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit95
B11boron concentrationgrowth chamber studyconcentration unit93
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
At2bacterial disease resistancegrowth chamber studycolony forming unit175
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
At1bacterial disease resistancegrowth chamber studycolony forming unit175
As75arsenic concentrationgrowth chamber studyconcentration unit93
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As2bacterial disease resistancegrowth chamber studycolony forming unit175
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Asbacterial disease resistancegrowth chamber studydimensionless unit175
Aphid numberaphid resistancegrowth chamber studycount unit94
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit177
Anthocyanin 16anthocyanin contentgrowth chamber studydimensionless unit176
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit177
After Vern Growthrelative growth rategrowth chamber studyratio110
8W GH LNleaf numbergrowth chamber studycount unit163