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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
0Wdays to flowering traitgrowth chamber studyday137
0W GH FTdays to flowering traitgrowth chamber studyday153
0W GH LNleaf numbergrowth chamber studycount unit135
2Wdays to flowering traitgrowth chamber studyday152
4Wdays to flowering traitgrowth chamber studyday119
8Wdays to flowering traitgrowth chamber studyday155
8W GH FTdays to flowering traitgrowth chamber studyday162
8W GH LNleaf numbergrowth chamber studycount unit163
After Vern Growthrelative growth rategrowth chamber studyratio110
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit177
Anthocyanin 16anthocyanin contentgrowth chamber studydimensionless unit176
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit177
Aphid numberaphid resistancegrowth chamber studycount unit94
Asbacterial disease resistancegrowth chamber studydimensionless unit175
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As2bacterial disease resistancegrowth chamber studycolony forming unit175
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As75arsenic concentrationgrowth chamber studyconcentration unit93
At1bacterial disease resistancegrowth chamber studycolony forming unit175
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175