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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
DW leaf necrosisgrowth chamber studygram
FW leaf necrosisgrowth chamber studygram
LESleaf necrosisgrowth chamber studydimensionless unit
FT Diameter Fieldleaf numbergrowth chamber studylength unit
LN16leaf numbergrowth chamber studycount unit
8W GH LNleaf numbergrowth chamber studycount unit
0W GH LNleaf numbergrowth chamber studycount unit
LN22leaf numbergrowth chamber studycount unit
LN10leaf numbergrowth chamber studycount unit
Trichome avg JAleaf trichome densitygrowth chamber studycount unit
Trichome avg Cleaf trichome densitygrowth chamber studycount unit
Li7lithium concentrationgrowth chamber studyconcentration unit
Mg25magnesium concentrationgrowth chamber studyconcentration unit
Mn55manganese concentrationgrowth chamber studyconcentration unit
Mo98molybdenum concentrationgrowth chamber studyconcentration unit
Ni60nickel concenterationgrowth chamber studyconcentration unit
P31phosphorus concentrationgrowth chamber studyconcentration unit
Width 16plant widthgrowth chamber studycentimeter
Width 10plant widthgrowth chamber studycentimeter
Width 22plant widthgrowth chamber studycentimeter