Unsplashed background img 1

DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Width 16plant widthgrowth chamber studycentimeter175
Width 10plant widthgrowth chamber studycentimeter176
Width 22plant widthgrowth chamber studycentimeter175
Hypocotyl lengthseedling hypocotyl lengthgrowth chamber studycentimeter89
Silique 16fruit lengthgrowth chamber studycentimeter95
Silique 22fruit lengthgrowth chamber studycentimeter95
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit95
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
At2bacterial disease resistancegrowth chamber studycolony forming unit175
At1bacterial disease resistancegrowth chamber studycolony forming unit175
As2bacterial disease resistancegrowth chamber studycolony forming unit175
Na23sodium concentrationgrowth chamber studyconcentration unit93
Cd114cadmium concentrationgrowth chamber studyconcentration unit93
Co59cobalt concentrationgrowth chamber studyconcentration unit93
Cu65copper concentrationgrowth chamber studyconcentration unit93
Se82selenium concentrationgrowth chamber studyconcentration unit93