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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Ca43calcium concentrationgrowth chamber studyconcentration unit93
B11boron concentrationgrowth chamber studyconcentration unit93
Ni60nickel concenterationgrowth chamber studyconcentration unit93
P31phosphorus concentrationgrowth chamber studyconcentration unit93
As75arsenic concentrationgrowth chamber studyconcentration unit93
Mo98molybdenum concentrationgrowth chamber studyconcentration unit93
Zn66zinc concentrationgrowth chamber studyconcentration unit93
K39potassium concentrationgrowth chamber studyconcentration unit93
S34sulfur concentrationgrowth chamber studyconcentration unit93
Mn55manganese concentrationgrowth chamber studyconcentration unit93
Fe56iron concentrationgrowth chamber studyconcentration unit93
Li7lithium concentrationgrowth chamber studyconcentration unit93
Mg25magnesium concentrationgrowth chamber studyconcentration unit93
Bsbacterial disease resistancegrowth chamber studycount unit175
8W GH LNleaf numbergrowth chamber studycount unit163
Aphid numberaphid resistancegrowth chamber studycount unit94
LN22leaf numbergrowth chamber studycount unit176
Trichome avg Cleaf trichome densitygrowth chamber studycount unit94
Trichome avg JAleaf trichome densitygrowth chamber studycount unit94
0W GH LNleaf numbergrowth chamber studycount unit135