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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
LN16leaf numbergrowth chamber studycount unit
Trichome avg JAleaf trichome densitygrowth chamber studycount unit
Seed Dormancyseed dormancygrowth chamber studyday
2Wdays to flowering traitgrowth chamber studyday
FT16days to flowering traitgrowth chamber studyday
FT10days to flowering traitgrowth chamber studyday
FT Duration GHreproductive growth timegrowth chamber studyday
LDVdays to flowering traitgrowth chamber studyday
0Wdays to flowering traitgrowth chamber studyday
MT GHreproductive growth timegrowth chamber studyday
Germ 22days to germinategrowth chamber studyday
SDdays to flowering traitgrowth chamber studyday
8Wdays to flowering traitgrowth chamber studyday
FT GHdays to flowering traitgrowth chamber studyday
DSDS50DSDS50growth chamber studyday
LC Duration GHreproductive growth timegrowth chamber studyday
0W GH FTdays to flowering traitgrowth chamber studyday
RP GHreproductive growth timegrowth chamber studyday
LFS GHreproductive growth timegrowth chamber studyday
Germ 10days to germinategrowth chamber studyday