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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Emwa1protist disease resistancegrowth chamber studydimensionless unit
avrRpt2bacterial disease resistancegrowth chamber studydimensionless unit
Noco2protist disease resistancegrowth chamber studydimensionless unit
Hiks1protist disease resistancegrowth chamber studydimensionless unit
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit
YEL leaf chlorosisgrowth chamber studydimensionless unit
LESleaf necrosisgrowth chamber studydimensionless unit
Emoy*protist disease resistancegrowth chamber studydimensionless unit
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit
avrRpm1bacterial disease resistancegrowth chamber studydimensionless unit
LY leaf necrosisgrowth chamber studydimensionless unit
avrBbacterial disease resistancegrowth chamber studydimensionless unit
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit
DW leaf necrosisgrowth chamber studygram
FW leaf necrosisgrowth chamber studygram
FT Diameter Fieldleaf numbergrowth chamber studylength unit
Storage 7 daysseed dormancygrowth chamber studypercent
Storage 28 daysseed dormancygrowth chamber studypercent
Storage 56 daysseed dormancygrowth chamber studypercent