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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Leaf roll 22rolled leafgrowth chamber studydimensionless unit176
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit177
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit176
Anthocyanin 16anthocyanin contentgrowth chamber studydimensionless unit176
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit177
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
Hiks1protist disease resistancegrowth chamber studydimensionless unit84
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit177
LESleaf necrosisgrowth chamber studydimensionless unit95
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
avrBbacterial disease resistancegrowth chamber studydimensionless unit87
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit176
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit90
Asbacterial disease resistancegrowth chamber studydimensionless unit175
FW leaf necrosisgrowth chamber studygram95
DW leaf necrosisgrowth chamber studygram95
FT Diameter Fieldleaf numbergrowth chamber studylength unit180
Storage 28 daysseed dormancygrowth chamber studypercent110
Storage 7 daysseed dormancygrowth chamber studypercent110
Storage 56 daysseed dormancygrowth chamber studypercent110