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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
YEL leaf chlorosisgrowth chamber studydimensionless unit95
DW leaf necrosisgrowth chamber studygram95
Seedling Growthrelative growth rategrowth chamber studyratio100
DSDS50DSDS50growth chamber studyday109
Vern Growthrelative growth rategrowth chamber studypercent110
After Vern Growthrelative growth rategrowth chamber studyratio110
Storage 56 daysseed dormancygrowth chamber studypercent110
Storage 7 daysseed dormancygrowth chamber studypercent110
Storage 28 daysseed dormancygrowth chamber studypercent110
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit110
4Wdays to flowering traitgrowth chamber studyday119
0W GH LNleaf numbergrowth chamber studycount unit135
0Wdays to flowering traitgrowth chamber studyday137
LC Duration GHreproductive growth timegrowth chamber studyday147
MT GHreproductive growth timegrowth chamber studyday147
RP GHreproductive growth timegrowth chamber studyday147
FT Duration GHreproductive growth timegrowth chamber studyday147
LFS GHreproductive growth timegrowth chamber studyday148
2Wdays to flowering traitgrowth chamber studyday152
0W GH FTdays to flowering traitgrowth chamber studyday153