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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
LN22leaf numbergrowth chamber studycount unit176
0W GH LNleaf numbergrowth chamber studycount unit135
LN10leaf numbergrowth chamber studycount unit177
LN16leaf numbergrowth chamber studycount unit176
LY leaf necrosisgrowth chamber studydimensionless unit95
FW leaf necrosisgrowth chamber studygram95
LESleaf necrosisgrowth chamber studydimensionless unit95
DW leaf necrosisgrowth chamber studygram95
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit176
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit174
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit177
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit176
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit176
YEL leaf chlorosisgrowth chamber studydimensionless unit95
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit177
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit176
Fe56iron concentrationgrowth chamber studyconcentration unit93
Secondary Dormancygermination ratiogrowth chamber studypercent93
Germ in darkgerminability in darkgrowth chamber studypercent93
Silique 16fruit lengthgrowth chamber studycentimeter95