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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
LDdays to flowering traitgrowth chamber studyday
8W GH FTdays to flowering traitgrowth chamber studyday
4Wdays to flowering traitgrowth chamber studyday
FT22days to flowering traitgrowth chamber studyday
SDVdays to flowering traitgrowth chamber studyday
LN16leaf numbergrowth chamber studycount unit
Bsbacterial disease resistancegrowth chamber studycount unit
Trichome avg JAleaf trichome densitygrowth chamber studycount unit
LN10leaf numbergrowth chamber studycount unit
0W GH LNleaf numbergrowth chamber studycount unit
Trichome avg Cleaf trichome densitygrowth chamber studycount unit
8W GH LNleaf numbergrowth chamber studycount unit
LN22leaf numbergrowth chamber studycount unit
Aphid numberaphid resistancegrowth chamber studycount unit
P31phosphorus concentrationgrowth chamber studyconcentration unit
As75arsenic concentrationgrowth chamber studyconcentration unit
Mo98molybdenum concentrationgrowth chamber studyconcentration unit
Se82selenium concentrationgrowth chamber studyconcentration unit
Zn66zinc concentrationgrowth chamber studyconcentration unit
Cu65copper concentrationgrowth chamber studyconcentration unit