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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit176
Leaf roll 16rolled leafgrowth chamber studydimensionless unit176
Germ 16days to germinategrowth chamber studyday176
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit176
Asbacterial disease resistancegrowth chamber studydimensionless unit175
Width 16plant widthgrowth chamber studycentimeter175
Width 22plant widthgrowth chamber studycentimeter175
At2bacterial disease resistancegrowth chamber studycolony forming unit175
As2bacterial disease resistancegrowth chamber studycolony forming unit175
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Bsbacterial disease resistancegrowth chamber studycount unit175
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
At1bacterial disease resistancegrowth chamber studycolony forming unit175
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit174
LDVdays to flowering traitgrowth chamber studyday168
FLCflowering time traitgrowth chamber studyratio167
LDdays to flowering traitgrowth chamber studyday167