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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FT GHdays to flowering traitgrowth chamber studyday166
FRIflowering time traitgrowth chamber studyratio164
8W GH LNleaf numbergrowth chamber studycount unit163
8W GH FTdays to flowering traitgrowth chamber studyday162
SDdays to flowering traitgrowth chamber studyday162
SDVdays to flowering traitgrowth chamber studyday159
8Wdays to flowering traitgrowth chamber studyday155
0W GH FTdays to flowering traitgrowth chamber studyday153
2Wdays to flowering traitgrowth chamber studyday152
LFS GHreproductive growth timegrowth chamber studyday148
MT GHreproductive growth timegrowth chamber studyday147
LC Duration GHreproductive growth timegrowth chamber studyday147
FT Duration GHreproductive growth timegrowth chamber studyday147
RP GHreproductive growth timegrowth chamber studyday147
0Wdays to flowering traitgrowth chamber studyday137
0W GH LNleaf numbergrowth chamber studycount unit135
4Wdays to flowering traitgrowth chamber studyday119
Storage 7 daysseed dormancygrowth chamber studypercent110
Storage 28 daysseed dormancygrowth chamber studypercent110
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit110