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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
Leaf serr 16leaf margin serratedgrowth chamber studydimensionless unit
Seed bank 133-91seed dormancygrowth chamber studydimensionless unit
Na23sodium concentrationgrowth chamber studyconcentration unit
Leaf serr 10leaf margin serratedgrowth chamber studydimensionless unit
Emco5protist disease resistancegrowth chamber studydimensionless unit
Leaf roll 16rolled leafgrowth chamber studydimensionless unit
Leaf roll 10leaf margin serratedgrowth chamber studydimensionless unit
Bsbacterial disease resistancegrowth chamber studycount unit
2Wdays to flowering traitgrowth chamber studyday
Rosette Erect 22rolled leafgrowth chamber studydimensionless unit
Cd114cadmium concentrationgrowth chamber studyconcentration unit
Width 16plant widthgrowth chamber studycentimeter
Storage 28 daysseed dormancygrowth chamber studypercent
LY leaf necrosisgrowth chamber studydimensionless unit
avrRpm1bacterial disease resistancegrowth chamber studydimensionless unit
Width 10plant widthgrowth chamber studycentimeter
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit
Storage 7 daysseed dormancygrowth chamber studypercent
FT Diameter Fieldleaf numbergrowth chamber studylength unit