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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
DSDS50DSDS50growth chamber studyday
Anthocyanin 22anthocyanin contentgrowth chamber studydimensionless unit
Anthocyanin 10anthocyanin contentgrowth chamber studydimensionless unit
Anthocyanin 16anthocyanin contentgrowth chamber studydimensionless unit
Aphid numberaphid resistancegrowth chamber studycount unit
As75arsenic concentrationgrowth chamber studyconcentration unit
avrRpt2bacterial disease resistancegrowth chamber studydimensionless unit
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit
avrBbacterial disease resistancegrowth chamber studydimensionless unit
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
At1bacterial disease resistancegrowth chamber studycolony forming unit
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit
avrRpm1bacterial disease resistancegrowth chamber studydimensionless unit
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
At2bacterial disease resistancegrowth chamber studycolony forming unit
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit
Bsbacterial disease resistancegrowth chamber studycount unit
As2bacterial disease resistancegrowth chamber studycolony forming unit