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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Silique 16fruit lengthgrowth chamber studycentimeter
Hypocotyl lengthseedling hypocotyl lengthgrowth chamber studycentimeter
Width 16plant widthgrowth chamber studycentimeter
Silique 22fruit lengthgrowth chamber studycentimeter
Width 22plant widthgrowth chamber studycentimeter
Width 10plant widthgrowth chamber studycentimeter
As2bacterial disease resistancegrowth chamber studycolony forming unit
As2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
At1 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit
At2bacterial disease resistancegrowth chamber studycolony forming unit
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit
As CFU2bacterial disease resistancegrowth chamber studycolony forming unit
At1bacterial disease resistancegrowth chamber studycolony forming unit
Ca43calcium concentrationgrowth chamber studyconcentration unit
B11boron concentrationgrowth chamber studyconcentration unit
Cd114cadmium concentrationgrowth chamber studyconcentration unit
Co59cobalt concentrationgrowth chamber studyconcentration unit
Se82selenium concentrationgrowth chamber studyconcentration unit