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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
Seed Dormancyseed dormancygrowth chamber studyday83
Hiks1protist disease resistancegrowth chamber studydimensionless unit84
avrRpm1bacterial disease resistancegrowth chamber studydimensionless unit84
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
Emco5protist disease resistancegrowth chamber studydimensionless unit86
avrBbacterial disease resistancegrowth chamber studydimensionless unit87
Noco2protist disease resistancegrowth chamber studydimensionless unit87
avrRpt2bacterial disease resistancegrowth chamber studydimensionless unit89
Hypocotyl lengthseedling hypocotyl lengthgrowth chamber studycentimeter89
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit90
Mg25magnesium concentrationgrowth chamber studyconcentration unit93
S34sulfur concentrationgrowth chamber studyconcentration unit93
Ca43calcium concentrationgrowth chamber studyconcentration unit93
Zn66zinc concentrationgrowth chamber studyconcentration unit93
As75arsenic concentrationgrowth chamber studyconcentration unit93
Co59cobalt concentrationgrowth chamber studyconcentration unit93
Secondary Dormancygermination ratiogrowth chamber studypercent93
Li7lithium concentrationgrowth chamber studyconcentration unit93
Na23sodium concentrationgrowth chamber studyconcentration unit93