Study: Lifetime fitness in Germany and Spain under rainfall manipulation
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DOI
Description
Data from Exposito-Alonso et al. (2019). A map of climate change-driven natural selection in Arabidopsis thaliana. Nature. The data is comprised of three fitness traits in eight experimental environments and 98 climate variables of origin. Fitness traits include Survival from germination to reproductive adult, the number of Seeds produced per individual adult, and the product of both (Fitness). The traits have already been scaled by the mean of the experimental population, so they are relative fitness traits. The codes of each experiment follow a three letter format. The first position is either "m" from Madrid (Spain), "t" from Tuebingen (Germany). The second position is either "h" from high rainfall or "l" from low rainfall. The third position is either "p" from population replicate pot (where plants are at high density), or "i" from an individual replicate pot (where there was one plant per pot). In combination, for example, the code "mlp" refers to the fitness in the experiment of Madrid, at low precipitation, and high plant population density in the plot. Climate variables were used to understand the relationship between genome variation and environment of origin. They were derived intersecting the geographic coordinates where natural lines were originally collected and climate maps from worldclim.org (and derived metrics).
Publications

Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
rSeeds mlpyield traitfield studyratio190
rSeeds tlpyield traitfield studyratio421
rSeeds mliyield traitfield studyratio423
clim-tmin12other miscellaneous traitecological environmenttemperature unit479
clim-tmin3other miscellaneous traitecological environmenttemperature unit482
clim-bio6other miscellaneous traitecological environmenttemperature unit497
clim-tmin2other miscellaneous traitecological environmenttemperature unit497
clim-tmin10other miscellaneous traitecological environmenttemperature unit498
clim-bio11other miscellaneous traitecological environmenttemperature unit499
clim-tmin1other miscellaneous traitecological environmenttemperature unit499
rSeeds tliyield traitfield studyratio499
clim-bio1500
clim-bio9other miscellaneous traitecological environmenttemperature unit500
clim-tmax3other miscellaneous traitecological environmenttemperature unit500
clim-aet8other miscellaneous traitecological environmentvolumetric flow rate unit501
clim-aet7other miscellaneous traitecological environmentvolumetric flow rate unit501
clim-aet9other miscellaneous traitecological environmentvolumetric flow rate unit501
clim-aet5other miscellaneous traitecological environmentvolumetric flow rate unit501
clim-aet4other miscellaneous traitecological environmentvolumetric flow rate unit501
clim-aet6other miscellaneous traitecological environmentvolumetric flow rate unit501