Accession: Col-0
Species:
Arabidopsis thaliana
Country:
US
Sitename:
Col
Collector:
Albert Kranz
Collected on:
-
Lat/Lon:
38.3 / -92.3
CS number:
Map
Scored in 3678 phenotypes:
| Phenotype Name | Trait Ontology (TO) | Environmental Ontoloy (EO) | Unit Ontology (UO) | # values | Study | Value (mean) |
|---|---|---|---|---|---|---|
| MRVL0 | root morphology trait | vertical agar growth medium | length unit | 1 | Salt induced changes in Root System Architecture | 4.841205 |
| Zn66 | zinc concentration | growth chamber study | concentration unit | 158 | Ion Concentration | 131.539028658 |
| F-mean Total length day003 | root length | plant growth medium | micron pixel | 1 | Root growth rates under nutrient deficiency | 107.0139 |
| Li7 | lithium concentration | growth chamber study | concentration unit | 158 | Ion Concentration | 29.0901733989 |
| FT10 | days to flowering trait | growth chamber study | day | 1 | 1001genomes flowering time phenotypes | 70.5 |
| DTFlocSweden2008 | days to flowering trait | — | dimensionless unit | 1 | Flowering time in simulated seasons | -15.74 |
| DTFmainEffect2009 | days to flowering trait | — | dimensionless unit | 1 | Flowering time in simulated seasons | 13.25 |
| Aphid number | aphid resistance | growth chamber study | count unit | 1 | Atwell et. al, Nature 2010 | 29.5 |
| Length | stem length | growth chamber study | length unit | 1 | 1001 Genomes & easyGWAS | 36.0 |
| AAT (Accelerated seed Aging Treatment) | seed longevity | warm/hot water temperature regimen | ratio | 1 | Seed longevity (Renard et. al., 2020) | 0.428197542 |
| avrRpt2 | bacterial disease resistance | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 1.0 |
| Metals in stomata | mineral and ion content related trait | growth chamber study | dimensionless unit | 1 | trichome_development_epidermis_metal_traits | 0.0 |
| root length day006 minusZn | root length | plant growth medium | micron pixel | 1 | Root growth under Zn deficiency Bouain et al. 2018 | 684.693333333 |
| deltaRGR P Fe norm on Fe norm | relative root length | plant growth medium | ratio | 1 | Root growth rates under nutrient deficiency | 0.160903532 |
| PC2sc75 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -0.097052051 |
| FLC | flowering time trait | growth chamber study | ratio | 1 | Atwell et. al, Nature 2010 | 0.127 |
| Seed bank 133-91 | seed dormancy | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 0.0 |
| PC3sc125 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -0.020536245 |
| Silique 22 | fruit length | growth chamber study | centimeter | 1 | Atwell et. al, Nature 2010 | 1.2 |
| Plastoquinone | metabolite content trait | growth chamber study | microgram | 1 | Isoprenoid concentration | 100.901274059 |