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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FT22days to flowering traitgrowth chamber studyday193
FT16days to flowering traitgrowth chamber studyday193
FT10days to flowering traitgrowth chamber studyday194
FT GHdays to flowering traitgrowth chamber studyday166
FT Fielddays to flowering traitgrowth chamber studyday180
FT Duration GHreproductive growth timegrowth chamber studyday147
FT Diameter Fieldleaf numbergrowth chamber studylength unit180
FRIflowering time traitgrowth chamber studyratio164
FLCflowering time traitgrowth chamber studyratio167
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
Emco5protist disease resistancegrowth chamber studydimensionless unit86
DW leaf necrosisgrowth chamber studygram95
DSDS50DSDS50growth chamber studyday109
Cu65copper concentrationgrowth chamber studyconcentration unit93
Co59cobalt concentrationgrowth chamber studyconcentration unit93
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit176
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit176
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit177
Cd114cadmium concentrationgrowth chamber studyconcentration unit93