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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
FT22days to flowering traitgrowth chamber studyday
FT16days to flowering traitgrowth chamber studyday
FT10days to flowering traitgrowth chamber studyday
FT GHdays to flowering traitgrowth chamber studyday
FT Fielddays to flowering traitgrowth chamber studyday
FT Duration GHreproductive growth timegrowth chamber studyday
FT Diameter Fieldleaf numbergrowth chamber studylength unit
FRIflowering time traitgrowth chamber studyratio
FLCflowering time traitgrowth chamber studyratio
Emwa1protist disease resistancegrowth chamber studydimensionless unit
Emoy*protist disease resistancegrowth chamber studydimensionless unit
Emco5protist disease resistancegrowth chamber studydimensionless unit
DW leaf necrosisgrowth chamber studygram
DSDS50DSDS50growth chamber studyday
Cu65copper concentrationgrowth chamber studyconcentration unit
Co59cobalt concentrationgrowth chamber studyconcentration unit
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit
Cd114cadmium concentrationgrowth chamber studyconcentration unit