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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
Co59cobalt concentrationgrowth chamber studyconcentration unit
FW leaf necrosisgrowth chamber studygram
Cu65copper concentrationgrowth chamber studyconcentration unit
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit
Width 22plant widthgrowth chamber studycentimeter
Storage 56 daysseed dormancygrowth chamber studypercent
YEL leaf chlorosisgrowth chamber studydimensionless unit
FLCflowering time traitgrowth chamber studyratio
FT16days to flowering traitgrowth chamber studyday
FT10days to flowering traitgrowth chamber studyday
FT Duration GHreproductive growth timegrowth chamber studyday
Se82selenium concentrationgrowth chamber studyconcentration unit
LDVdays to flowering traitgrowth chamber studyday
Noco2protist disease resistancegrowth chamber studydimensionless unit
8W GH LNleaf numbergrowth chamber studycount unit
0Wdays to flowering traitgrowth chamber studyday
MT GHreproductive growth timegrowth chamber studyday
After Vern Growthrelative growth rategrowth chamber studyratio
Aphid numberaphid resistancegrowth chamber studycount unit
FT Diameter Fieldleaf numbergrowth chamber studylength unit