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DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
K39potassium concentrationgrowth chamber studyconcentration unit
0W GH LNleaf numbergrowth chamber studycount unit
At2bacterial disease resistancegrowth chamber studycolony forming unit
At1bacterial disease resistancegrowth chamber studycolony forming unit
LN10leaf numbergrowth chamber studycount unit
FT Fielddays to flowering traitgrowth chamber studyday
LN16leaf numbergrowth chamber studycount unit
avrBbacterial disease resistancegrowth chamber studydimensionless unit
LDdays to flowering traitgrowth chamber studyday
Seedling Growthrelative growth rategrowth chamber studyratio
S34sulfur concentrationgrowth chamber studyconcentration unit
Leaf serr 22leaf margin serratedgrowth chamber studydimensionless unit
DW leaf necrosisgrowth chamber studygram
Seed Dormancyseed dormancygrowth chamber studyday
Mn55manganese concentrationgrowth chamber studyconcentration unit
Silique 22fruit lengthgrowth chamber studycentimeter
avrPphBbacterial disease resistancegrowth chamber studydimensionless unit
Fe56iron concentrationgrowth chamber studyconcentration unit
8W GH FTdays to flowering traitgrowth chamber studyday
4Wdays to flowering traitgrowth chamber studyday