Unsplashed background img 1

DOI
Description
GWAS of 107 phenotypes in Arabidopsis thaliana inbred lines using ~250k SNPs in 199 accessions
Publications
  • Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

    Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M

    Nature. 2010 465(7298): 627-31. doi: 10.1038/nature08800


Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
At2bacterial disease resistancegrowth chamber studycolony forming unit175
At2 CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
B11boron concentrationgrowth chamber studyconcentration unit93
Bacterial titerbacterial disease resistancegrowth chamber studycolony forming unit95
Bsbacterial disease resistancegrowth chamber studycount unit175
Bs CFU2bacterial disease resistancegrowth chamber studycolony forming unit175
Ca43calcium concentrationgrowth chamber studyconcentration unit93
Cd114cadmium concentrationgrowth chamber studyconcentration unit93
Chlorosis 10leaf chlorosisgrowth chamber studydimensionless unit177
Chlorosis 16leaf chlorosisgrowth chamber studydimensionless unit176
Chlorosis 22leaf chlorosisgrowth chamber studydimensionless unit176
Co59cobalt concentrationgrowth chamber studyconcentration unit93
Cu65copper concentrationgrowth chamber studyconcentration unit93
DSDS50DSDS50growth chamber studyday109
DW leaf necrosisgrowth chamber studygram95
Emco5protist disease resistancegrowth chamber studydimensionless unit86
Emoy*protist disease resistancegrowth chamber studydimensionless unit76
Emwa1protist disease resistancegrowth chamber studydimensionless unit85
FLCflowering time traitgrowth chamber studyratio167
FRIflowering time traitgrowth chamber studyratio164