Study: Genetic dissection of shoot regeneration from root explants in Arabidopsis (Lardon et al., 2020)
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DOI
Description
In the frame of a genome-wide association study, we have subjected 170 natural Arabidopsis thaliana accessions to two protocol variants for shoot regeneration from root explants and recorded substantial variation in regenerated shoot numbers and several related in vitro traits. The results of this study are reported in "The genetic framework of shoot regeneration in Arabidopsis comprises master regulators and conditional fine-tuning factors" (Lardon et al., Commun. Biol., 2020).
Publications

Phenotype NameTrait Ontology (TO)Environmental Ontoloy (EO)Unit Ontology (UO)# values
greening 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1688
area 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumarea unit1688
greening 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1703
area 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumarea unit1703
undefined structures 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1711
shoot primordia 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1711
shoots 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1711
callus score 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1711
root-like structures 21d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1711
undefined structures 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1713
shoots 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1713
root-like structures 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1713
shoot primordia 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumcount unit1713
callus score 15d protocol ain vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit1713
greening 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit2132
area 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumarea unit2132
area 21d protocol bin vitro plant structure morphology traitin vitro solid growth mediumarea unit2148
greening 21d protocol bin vitro plant structure morphology traitin vitro solid growth mediumdimensionless unit2148
undefined structures 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumcount unit2164
shoots 15d protocol bin vitro plant structure morphology traitin vitro solid growth mediumcount unit2164