Accession: App1-16
Species:
Arabidopsis thaliana
Country:
Sweden
Sitename:
App1
Collector:
Magnus Nordborg
Collected on:
-
Lat/Lon:
56.3333 / 15.9667
CS number:
Map
Scored in 264 phenotypes:
| Phenotype Name | Trait Ontology (TO) | Environmental Ontoloy (EO) | Unit Ontology (UO) | # values | Study | Value (mean) |
|---|---|---|---|---|---|---|
| PC2sc75 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -0.670194532 |
| Trichome perimeter | trichome morphology trait | growth chamber study | length unit | 1 | trichome_development_epidermis_metal_traits | 2257.028 |
| As75 | arsenic concentration | growth chamber study | concentration unit | 6 | Ion Concentration | 1.00141214 |
| PC3sc125 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -0.497171337 |
| LRDpMR125 | root morphology trait | vertical agar growth medium | count unit | 1 | Salt induced changes in Root System Architecture | 2.7059025 |
| MRVL125 | root morphology trait | vertical agar growth medium | ratio | 1 | Salt induced changes in Root System Architecture | 2.092995 |
| Leaf S Mine (μg/g) | sulfur concentration | green house study | microgram | 1 | Pb Mine soil | 1672.92 |
| RBN | primary branch number | growth chamber study | count unit | 1 | 1001 Genomes & easyGWAS | 5.0 |
| MRLpTRS75 | root morphology trait | vertical agar growth medium | ratio | 1 | Salt induced changes in Root System Architecture | 0.755481515 |
| LRDpMR75 | root morphology trait | vertical agar growth medium | count unit | 1 | Salt induced changes in Root System Architecture | 3.1444065 |
| MRVA0 | root morphology trait | vertical agar growth medium | degree | 1 | Salt induced changes in Root System Architecture | 7.4963525 |
| LRLpMRL1225 | root morphology trait | vertical agar growth medium | ratio | 1 | Salt induced changes in Root System Architecture | 0.208818151 |
| DTF sweden 2009 (1st experiment) | days to flowering trait | — | day | 1 | Flowering time in simulated seasons | 78.5 |
| stomata density 261 | adaxial stomatal frequency | growth chamber study | density unit | 1 | Natural variation in stomata size (Dittberner et al. 2018) | 196.666666667 |
| S34 | sulfur concentration | growth chamber study | concentration unit | 6 | Ion Concentration | 3927.3338075 |
| M216T665 | metabolite content trait | — | concentration unit | 1 | DAAR | 5.67 |
| Metal ring in trichomes | mineral and ion content related trait | growth chamber study | dimensionless unit | 1 | trichome_development_epidermis_metal_traits | 2.0 |
| Apical125 | root morphology trait | vertical agar growth medium | length unit | 1 | Salt induced changes in Root System Architecture | 1.12487725 |
| Leaf K Mine (μg/g) | potassium concentration | green house study | microgram | 1 | Pb Mine soil | 11860.87 |
| aLRL75 | root morphology trait | vertical agar growth medium | length unit | 1 | Salt induced changes in Root System Architecture | 0.11713116 |