Accession: Col-0
Species:
Arabidopsis thaliana
Country:
US
Sitename:
Col
Collector:
Albert Kranz
Collected on:
-
Lat/Lon:
38.3 / -92.3
CS number:
Map
Scored in 3678 phenotypes:
| Phenotype Name | Trait Ontology (TO) | Environmental Ontoloy (EO) | Unit Ontology (UO) | # values | Study | Value (mean) |
|---|---|---|---|---|---|---|
| PC2sc0 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | -2.148577139 |
| aLRLpMRL75 | root morphology trait | vertical agar growth medium | ratio | 1 | Salt induced changes in Root System Architecture | 0.072932065 |
| PC1sc125 | root morphology trait | vertical agar growth medium | dimensionless unit | 1 | Salt induced changes in Root System Architecture | 0.225729148 |
| Raffinose 32C | carbohydrate content | growth chamber study | concentration unit | 1 | Raffinose (22°C and 32°C) | 84.57 |
| B11 | boron concentration | growth chamber study | concentration unit | 158 | Ion Concentration | 147.004122932 |
| Mean(LRD R) CK | root mass density | cytokinin treatment | mass density unit | 1 | Cytokinin (CK) treatment | 0.3756 |
| DTFplantingSummerLocSweden2009 | days to flowering trait | — | dimensionless unit | 1 | Flowering time in simulated seasons | 15.8947 |
| MS-mean Total length day005 | root length | plant growth medium | micron pixel | 1 | Root growth rates under nutrient deficiency | 517.12725 |
| F-mean Total length day004 | root length | plant growth medium | micron pixel | 1 | Root growth rates under nutrient deficiency | 230.8432 |
| area 15d protocol a | in vitro plant structure morphology trait | in vitro solid growth medium | area unit | 12 | Genetic dissection of shoot regeneration from root explants in Arabidopsis (Lardon et al., 2020) | 11780.4166667 |
| Leaf Mn Mine (μg/g) | manganese concentration | green house study | microgram | 1 | Pb Mine soil | 40.83 |
| Gravitropic setpoint angle (GSA) | gravity response trait | in vitro growth medium | angle unit | 1 | Gravitropic setpoint angle (GSA) | 1.4 |
| Ni60 | nickel concenteration | growth chamber study | concentration unit | 158 | Ion Concentration | 6.87990697372 |
| avrB | bacterial disease resistance | growth chamber study | dimensionless unit | 1 | Atwell et. al, Nature 2010 | 1.0 |
| RGR Fe | relative root length | plant growth medium | rate unit | 1 | Root growth rates under nutrient deficiency | 94.88824 |
| Apical0 | root morphology trait | vertical agar growth medium | length unit | 1 | Salt induced changes in Root System Architecture | 2.9728775 |
| DTF1 | days to flowering trait | growth chamber study | day | 1 | 1001 Genomes & easyGWAS | 28.0 |
| 8W | days to flowering trait | growth chamber study | day | 1 | Atwell et. al, Nature 2010 | 18.6 |
| Raffinose 22C | carbohydrate content | growth chamber study | concentration unit | 1 | Raffinose (22°C and 32°C) | 6.75 |
| K39 | potassium concentration | growth chamber study | concentration unit | 1 | Atwell et. al, Nature 2010 | 26502.8 |